I did a series of post in 2019 showing the basics of what I am doing on the site here. It is not precisely how I am currently doing, it is closer to a specification of what I would love to do if I can get funding for the work.

OpenSource Microbiome Project

Uploading ncbi hierarchy data

Upload ubiome Json

Upload Taxon Name based Files

Medical Tests Reports

Thryve Upload Code has been added

Importing medical conditions ( ICD tables)

Obtaining Source Citations

Example of uploading a PDF Report

Computing Statistics

Detecting Duplicate Uploads

Non Parametric Detection

Other Medical Properties

Connecting the dots…

Populating with Open Data

Sharing Data

Exporting data for DataScience

Very fine tuning of suggestions to modify the microbiome

For whom the bell (curve) tolls…

Atlas Bio Upload Notes