Deep Dive into Probiotics for Histamine or Mast Cell issues

This is from a special analysis identifying bacteria that are probiotics that have association to histamines and mast cell issues using the 394 annotated samples contributed.

Some species are to be avoided. Keeping to the specified species is strongly recommended,

Tax_NameTax_rankSymptom
Frequency
No Symptom
Frequency
Suggests
Bifidobacterium adolescentisspecies33.548.8Take
Bifidobacterium pseudocatenulatumspecies8.97.7Avoid
Lactococcusgenus42.955.6Take
Bifidobacterium gallicumspecies18.827.7Take
Bifidobacterium kashiwanohense PV20-2strain10.720.3Take
Bifidobacterium indicumspecies27.439.8Take
Bifidobacteriumgenus83.894.4Take
Bifidobacterium catenulatum subsp. kashiwanohensesubspecies13.721.9Take
Bifidobacteriaceaefamily85.395.4Take
Bifidobacterialesorder85.595.4Take
Lactobacillus rogosaespecies22.826.6Take
Bifidobacterium bombispecies13.721.3Take
Lactobacillaceaefamily91.196.7Take
Lactobacillus inersspecies10.214.1Take
Bifidobacterium subtilespecies22.626.8Take
Lactobacillusgenus83.289Take
Bifidobacterium thermacidophilumspecies12.214.7Take
Lactobacillalesorder97100Take
Lactococcus lactisspecies1418.3Take

In terms of bacteria patterns found, the following were found statistically significant

Tax_NameTax_rankSymptom
Frequency
No Symptom
Frequency
unclassified Clostridialesfamily50.529.2Too many
Elusimicrobiaphylum8.43.8Too many
Prevotella paludivivensspecies9.619Too Few
Lacrimispora saccharolyticaspecies10.28Too many
Alistipes sp. NML05A004species13.77.7Too many
Proteusgenus8.47.4Too many
Butyricimonas sp. 214-4species10.74.7Too many
Bifidobacterium adolescentisspecies33.548.8Too Few
Pseudobutyrivibrio xylanivoransspecies35.349.7Too Few
Bacillales Family XI. Incertae Sedisnorank52.569.1Too Few
Papillibactergenus35.323.5Too many
Gemellagenus52.368.6Too Few
Tepidibactergenus10.916.7Too Few
Oribacterium sinusspecies55.671.2Too Few
Elusimicrobiaclass8.13.1Too many
Citrobacter freundii complexspecies group8.98.1Too many
Peptoclostridiumgenus23.618Too many
Natronincolagenus29.744Too Few
Prevotella coprispecies56.972.2Too Few
unclassified Alistipesnorank1911.9Too many
unclassified Butyricimonasnorank14.55.1Too many
Natronincola peptidivoransspecies26.141.3Too Few
Ruminococcus gnavusspecies6780.8Too Few
Veillonella disparspecies36.352.1Too Few
Streptococcus sanguinisspecies15.221.7Too Few
Caulobacteralesorder19.328.8Too Few
Caulobacteraceaefamily19.328.8Too Few
Streptococcus vestibularisspecies30.744Too Few
Caloramator mitchellensisspecies35.849.9Too Few
Streptococcus fryispecies17.828.9Too Few
Pectinatus cerevisiiphilusspecies28.942.7Too Few
Bifidobacterium pseudocatenulatumspecies8.97.7Too many
Anaerobranca zavarziniispecies27.939.8Too Few
Lactococcusgenus42.955.6Too Few
Natranaerobialesorder30.742.2Too Few