Some recent work has identified bacteria that are associated with Autism. For a summary of method, see this post. The following are the list of bacteria seen with Ombre/Thryve samples that are annotated with Autism. There are not sufficient samples yet for specific autism characteristics – so please check your uploaded samples and update the symptoms.

Note the list is Ombre/Thryve specific and cannot be applied to other microbiome reports. There is also Bacteria to Hand-Pick for Autism with Biomesight samples

These are bacteria that you want to reduce (with one caveat — the suggestions algorithm requires the percentile to be 50%ile or more). How to hand pick them? See below the list.

Note: you may only have a few of these. They are shown in the same sequence as seen on Microbiome Tree. The LAST item is what was found to be statistically significant.

1. Proteobacteria Gammaproteobacteria Gammaproteobacteria incertae sedis
2. Pectobacteriaceae Brenneria Brenneria alni
3. Enterobacterales Enterobacteriaceae Klebsiella/Raoultella group
4. Enterobacteriaceae Klebsiella/Raoultella group Klebsiella
5. Alphaproteobacteria Hyphomicrobiales Devosiaceae
6. Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae
7. Betaproteobacteria Neisseriales Neisseriaceae
8. Betaproteobacteria Rhodocyclales Zoogloeaceae
9. Burkholderiales Burkholderiaceae Burkholderia
10. Sutterellaceae Sutterella Sutterella wadsworthensis
11. Bacteria Proteobacteria delta/epsilon subdivisions
12. Proteobacteria delta/epsilon subdivisions Deltaproteobacteria
13. Desulfovibrionaceae Desulfovibrio Desulfovibrio piger
14. PVC group Verrucomicrobia Opitutae
15. Flavobacteriia Flavobacteriales Cryomorphaceae
16. Flavobacteriales Cryomorphaceae Cryomorpha
17. Cryomorphaceae Cryomorpha Cryomorpha ignava
18. Bacteroidetes/Chlorobi group Bacteroidetes Sphingobacteriia
19. Bacteroidetes Sphingobacteriia Sphingobacteriales
20. Sphingobacteriia Sphingobacteriales Sphingobacteriaceae
21. Bacteroidales Porphyromonadaceae Porphyromonas
22. Clostridia Eubacteriales Defluviitaleaceae
23. Eubacteriales Defluviitaleaceae Defluviitalea
24. Clostridia Eubacteriales Proteinivoraceae
25. Eubacteriales Proteinivoraceae Anaerobranca
26. Eubacteriales Lachnospiraceae Butyrivibrio
27. Lachnospiraceae Butyrivibrio Butyrivibrio crossotus
28. Lachnospiraceae Butyrivibrio Butyrivibrio fibrisolvens
29. Eubacteriaceae Eubacterium Eubacterium coprostanoligenes
30. Eubacteriales Peptococcaceae Desulfosporosinus
31. Eubacteriales Clostridiaceae Alkaliphilus
32. Clostridiaceae Clostridium Clostridium oryzae
33. Clostridiaceae Clostridium Clostridium lundense
34. Clostridiaceae Clostridium Clostridium intestinale
35. Eubacteriales Clostridiaceae Lactonifactor
36. Eubacteriales Clostridiaceae Caloramator
37. Eubacteriales Eubacteriales incertae sedis Natranaerovirga
38. Eubacteriales Eubacteriales incertae sedis [Bacteroides] pectinophilus
39. Clostridia Thermosediminibacterales Thermosediminibacteraceae
40. Terrabacteria group Firmicutes Firmicutes sensu stricto incertae sedis
41. Firmicutes Firmicutes sensu stricto incertae sedis Hydrogenispora
42. Selenomonadales Sporomusaceae Anaerospora
43. Sporomusaceae Anaerospora Anaerospora hongkongensis
44. Selenomonadales Selenomonadaceae Megamonas
45. Bacilli Bacillales Listeriaceae
46. Bacillales Listeriaceae Listeria
47. Bacilli Bacillales Bacillales incertae sedis
48. Bacillales Bacillales incertae sedis Bacillales Family X. Incertae Sedis
49. Bacillales incertae sedis Bacillales Family X. Incertae Sedis Thermicanus
50. Lactobacillales Lactobacillaceae Limosilactobacillus
51. Lactobacillaceae Limosilactobacillus Limosilactobacillus fermentum
52. Lactobacillales Lactobacillaceae Liquorilactobacillus
53. Lactobacillaceae Liquorilactobacillus Liquorilactobacillus vini
54. Cyanobacteria/Melainabacteria group Cyanobacteria Oscillatoriophycideae
55. Cyanobacteria Oscillatoriophycideae Oscillatoriales
56. Bacteria Terrabacteria group Chloroflexi
57. Terrabacteria group Chloroflexi Chloroflexia
58. Bacteria Terrabacteria group Actinobacteria
59. Terrabacteria group Actinobacteria Actinomycetia
60. Actinobacteria Actinomycetia Bifidobacteriales
61. Actinomycetia Bifidobacteriales Bifidobacteriaceae
62. Bifidobacteriales Bifidobacteriaceae Bifidobacterium
63. Bifidobacteriaceae Bifidobacterium Bifidobacterium bifidum
64. Bifidobacteriaceae Bifidobacterium Bifidobacterium asteroides
65. Bifidobacteriaceae Bifidobacterium Bifidobacterium subtile
66. Actinomycetia Propionibacteriales Nocardioidaceae
67. Actinobacteria Coriobacteriia Coriobacteriales
68. Coriobacteriia Coriobacteriales Coriobacteriaceae
69. Coriobacteriales Coriobacteriaceae Senegalimassilia
70. Coriobacteriaceae Senegalimassilia Senegalimassilia anaerobia
71. Tenericutes Mollicutes Entomoplasmatales
72. Mollicutes Entomoplasmatales Spiroplasmataceae
73. Entomoplasmatales Spiroplasmataceae Spiroplasma
74. Tenericutes Mollicutes Anaeroplasmatales
75. Mollicutes Anaeroplasmatales Anaeroplasmataceae
76. Anaeroplasmatales Anaeroplasmataceae Anaeroplasma
77. Acidobacteria Acidobacteriia Acidobacteriales
78. Acidobacteriia Acidobacteriales Acidobacteriaceae
79. cellular organisms Bacteria Elusimicrobia
80. Bacteria Elusimicrobia Elusimicrobia

To make a selection, just check the appropriate checkboxes.